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How do you make an amino acid chain?

Published in Biochemistry 3 mins read

You create an amino acid chain by forming a chain of two or more carbon atoms, attaching an amino group (-NH2) at one end, a carboxyl group (-COOH) at the other, a hydrogen atom (-H) to one side of the central carbon, and an R-group (a variable side chain) to the other side.

Breaking Down Amino Acid Chain Formation

Here's a more detailed explanation of the process:

1. The Basic Amino Acid Structure

Every amino acid shares a core structure:

  • A central carbon atom (the α-carbon).
  • An amino group (-NH2): This group gives the "amino" part of the name.
  • A carboxyl group (-COOH): This group gives the "acid" part of the name.
  • A hydrogen atom (-H).
  • An R-group (side chain): This is the variable part that distinguishes one amino acid from another. Each of the 20 common amino acids has a unique R-group.

2. Forming a Peptide Bond

To create an amino acid chain (also known as a polypeptide or a protein), amino acids are linked together through a process called dehydration synthesis or condensation reaction.

  • The Carboxyl group (-COOH) of one amino acid reacts with the Amino group (-NH2) of another amino acid.

  • A molecule of water (H2O) is released.

  • A covalent bond, called a peptide bond (-CO-NH-), is formed between the two amino acids.

3. Creating the Chain

This process is repeated, adding more amino acids to the chain one at a time. The amino acid at one end of the chain will have a free amino group (the N-terminus), and the amino acid at the other end will have a free carboxyl group (the C-terminus).

4. Examples

Think of it like building with LEGO bricks, where each amino acid is a brick. The peptide bond is the connection that holds the bricks together.

Simple example:

Imagine combining two amino acids, Alanine (Ala) and Glycine (Gly).

  1. The -COOH from Alanine reacts with the -NH2 from Glycine.
  2. Water (H2O) is released.
  3. A peptide bond forms, linking Alanine and Glycine together to form a dipeptide (Ala-Gly).

5. From Polypeptide to Protein

A chain of amino acids linked by peptide bonds is called a polypeptide. Proteins are often composed of one or more polypeptide chains folded into a specific three-dimensional structure. This structure is critical to the protein's function.

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