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What is the bond between amino acids and tRNA?

Published in Molecular Bonds 3 mins read

The bond between amino acids and tRNA is an ester bond.

While the question focuses on the bond between the amino acid and tRNA, it's crucial to understand how this relationship plays out during protein synthesis. The reference provided details the peptide bond formation, which is a bond between amino acids, not directly between the amino acid and the tRNA. Here's a more thorough explanation:

The Relationship Between Amino Acids and tRNA

  • Aminoacyl-tRNA formation: An amino acid is attached to its corresponding tRNA molecule through a process called aminoacylation. This process involves a specific enzyme, aminoacyl-tRNA synthetase, that catalyzes the formation of the ester bond.
  • Ester Bond: The carboxyl group (-COOH) of the amino acid reacts with the 3' hydroxyl group (-OH) of the tRNA molecule's terminal adenosine residue (part of the CCA sequence at the 3’ end). This reaction produces an ester bond and releases a water molecule.
  • Charged tRNA: The resulting molecule, with the amino acid bound to the tRNA, is called aminoacyl-tRNA or charged tRNA. This charged tRNA is then delivered to the ribosome for protein synthesis.

Peptide Bond Formation (Explained further using reference)

The reference focuses on peptide bonds, which link amino acids together during protein synthesis. Here's how that ties in:

  • Ribosome's Role: Ribosomes are the machinery where translation occurs. They contain sites (A-site, P-site, E-site) for tRNA binding.
  • Peptide Bond Formation: As the ribosome moves along the mRNA, tRNA molecules with their attached amino acids arrive at the A-site. A peptide bond then forms between the amino acid attached to the tRNA in the A-site and the amino acid chain (polypeptide) held by the tRNA in the P-site.
  • Peptidyl Transferase: This reaction is catalyzed by peptidyl transferase, an RNA-based enzyme that is part of the 50S ribosomal subunit.
  • Translocation: After the peptide bond is formed, the tRNA in the P-site is now "uncharged" (no longer attached to an amino acid) and moves to the E-site and exits the ribosome. The tRNA that was previously in the A-site now carrying the polypeptide chain shifts to the P-site.
  • Repetition: This process repeats adding amino acids to the growing polypeptide chain.
Aspect Description
Amino Acid to tRNA Bond Ester bond between the carboxyl group of amino acid and 3' OH of tRNA
Bond in Translation Peptide bond between amino acids (reference)
Enzymes Aminoacyl-tRNA synthetase (for amino acid-tRNA bonding) and peptidyl transferase (for peptide bonding)

Conclusion

In essence, while the reference details the peptide bond formed between amino acids during translation, the bond directly between an amino acid and its tRNA is an ester bond, facilitating amino acid delivery to the ribosome.

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